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1

Crystal structure of wild-type human procathepsin K

J. Sivaraman, Manon Lalumière1, Robert Ménard, Miroslaw Cygler

Journal:

Protein Science

Year:

1999

Language:

english

File:

PDF, 1.27 MB

english, 1999

2

1·8 Å Refined Structure of the Lipase from Geotrichum candidum

Joseph D. Schrag, Miroslaw Cygler

Journal:

Journal of Molecular Biology

Year:

1993

File:

PDF, 977 KB

1993

3

The α / β hydrolase fold

Ollis, David L., Cheah, Eong, Cygler, Miroslaw, Dijkstra, Bauke, Frolow, Felix, Franken, Sybille M., Harel, Michal, Remington, S. Jamse, Silman, Israel, Schrag, Joseph, Sussman, Joel L., Verschueren,

Journal:

Protein Engineering Design and Selection

Year:

1992

Language:

english

File:

PDF, 6.63 MB

english, 1992

4

Identification of Residues Essential for Differential Fatty Acyl Specificity of Geotrichum candidum Lipases I and II †

Holmquist, Mats, Tessier, Daniel C., Cygler, Miroslaw

Journal:

Year:

1997

Language:

english

File:

PDF, 149 KB

english, 1997

5

NleH Defines a New Family of Bacterial Effector Kinases

Grishin, Andrey M., Cherney, Maia, Anderson, Deborah H., Phanse, Sadhna, Babu, Mohan, Cygler, Miroslaw

Journal:

Year:

2014

Language:

english

File:

PDF, 3.23 MB

english, 2014

6

Insights from protein-protein interaction studies on bacterial pathogenesis

Gagarinova, Alla, Phanse, Sadhna, Cygler, Miroslaw, Babu, Mohan

Journal:

Expert Review of Proteomics

Year:

2017

Language:

english

File:

PDF, 2.15 MB

english, 2017

7

Structure–function analyses of a PL24 family ulvan lyase reveal key features and suggest its catalytic mechanism

Ulaganathan, ThirumalaiSelvi, Helbert, William, Kopel, Moran, Banin, Ehud, Cygler, Miroslaw

Journal:

Journal of Biological Chemistry

Year:

2018

Language:

english

File:

PDF, 2.85 MB

english, 2018

8

Crystallization and preliminary x-ray diffraction studies of human procathepsin L

René Coulombe, Yunge Li, Sachiko Takebe, Robert Ménard, Patrizia Mason, John S. Mort, Miroslaw Cygler

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

1996

Language:

english

File:

PDF, 280 KB

english, 1996

9

Crystallization of the bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase domain of the human trifunctional enzyme

Allaire, Marc, Li, Yunge, Mejia, Narciso R., Pelletier, Joelle N., MacKenzie, Robert E., Cygler, Miroslaw

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

1996

Language:

english

File:

PDF, 224 KB

english, 1996

10

Structural basis for specificity of papain-like cysteine protease proregions toward their cognate enzymes

Matthew R. Groves, René Coulombe, John Jenkins, Miroslaw Cygler

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

1998

Language:

english

File:

PDF, 468 KB

english, 1998

11

Antibodies to DNA

Wayne F. Anderson, Miroslaw Cygler, Ralph P. Braun, Jeremy S. Lee

Journal:

Year:

1988

Language:

english

File:

PDF, 822 KB

english, 1988

12

An Atypical Approach Identifies TYR234 as the Key Base Catalyst in Chondroitin AC Lyase

Carl S. Rye, Allan Matte, Miroslaw Cygler, Stephen G. Withers

Journal:

Year:

2006

Language:

english

File:

PDF, 135 KB

english, 2006

13

Computer modeling studies of the structure of a repressor

Wayne F. Anderson, Miroslaw Cygler

Journal:

Year:

1985

Language:

english

File:

PDF, 996 KB

english, 1985

14

Quantitative continuous assay for hyaluronan synthase

Joanne C. Krupa, David Shaya, Lianli Chi, Robert J. Linhardt, Miroslaw Cygler, Stephen G. Withers, John S. Mort

Journal:

Analytical Biochemistry

Year:

2007

Language:

english

File:

PDF, 421 KB

english, 2007

15

Liquid chromatography–mass spectrometry to study chondroitin lyase action pattern

Zhenqing Zhang, Youmie Park, Melissa M. Kemp, Wenjing Zhao, A-Rang Im, David Shaya, Miroslaw Cygler, Yeong Shik Kim, Robert J. Linhardt

Journal:

Analytical Biochemistry

Year:

2009

Language:

english

File:

PDF, 814 KB

english, 2009

16

Structure and Function of the Glycopeptide N-methyltransferase MtfA, a Tool for the Biosynthesis of Modified Glycopeptide Antibiotics

Rong Shi, Sherry S. Lamb, Bijan Zakeri, Ariane Proteau, Qizhi Cui, Traian Sulea, Allan Matte, Gerard D. Wright, Miroslaw Cygler

Journal:

Chemistry & Biology

Year:

2009

Language:

english

File:

PDF, 762 KB

english, 2009

17

A structural genomics pilot project based on gene targets selected from Escherichia coli

J Sivaraman, Yunge Li, Josée Plamondon, Robert Larocque, Stéphane Raymond, Véronique Sauvé, Christopher Smith, Lorena Boju, Joseph Schrag, Allan Matte, Terry Gaasterland, Miroslaw Cygler

Journal:

Journal of Crystal Growth

Year:

2001

Language:

english

File:

PDF, 168 KB

english, 2001

18

Structure of GlgS fromEscherichia colisuggests a role in protein–protein interactions

Guennadi Kozlov, Demetra Elias, Miroslaw Cygler, Kalle Gehring

Journal:

Year:

2004

Language:

english

File:

PDF, 1.78 MB

english, 2004

19

Relationship between sequence conservation and three-dimensional structure in a large family of esterases, lipases, and related proteins

Miroslaw Cygler, Joseph D. Schrag, Joel L. Sussman, Michal Harel, Israel Silman, Mary K. Gentry, Bhupendra P. Doctor

Journal:

Protein Science

Year:

1993

Language:

english

File:

PDF, 8.32 MB

english, 1993

20

Two conformational states of Candida rugosa lipase

Pawel Grochulski, Yunge Li, Joseph D. Schrag, Miroslaw Cygler

Journal:

Protein Science

Year:

1994

Language:

english

File:

PDF, 3.58 MB

english, 1994

21

Crystallization of a soluble form of the Kexlp serine carboxypeptidase from Saccharomyces cerevisiae

Daniel Tessier, David Y. Thomas, Brian H. Shilton, Yunge Li, Miroslaw Cygler

Journal:

Protein Science

Year:

1996

Language:

english

File:

PDF, 342 KB

english, 1996

22

Ca2+-Binding domain VI of rat calpain is a homodimer in solution: Hydrodynamic, crystallization and preliminary X-ray diffraction studies

Helen Blanchard, Yunge Li, Miroslaw Cygler, Cyril M. Kay, J. Simon C. Arthur, Peter L. Davies, John S. Elce

Journal:

Protein Science

Year:

1996

Language:

english

File:

PDF, 313 KB

english, 1996

23

Structural and enzymatic characterization of NanS (YjhS), a 9-O-Acetyl N-acetylneuraminic acid esterase from Escherichia coli O157:H7

Erumbi S. Rangarajan, Karen M. Ruane, Ariane Proteau, Joseph D. Schrag, Ricardo Valladares, Claudio F. Gonzalez, Michel Gilbert, Alexander F. Yakunin, Miroslaw Cygler

Journal:

Protein Science

Year:

2011

Language:

english

File:

PDF, 631 KB

english, 2011

24

Crystal structure of the YciO protein from Escherichia coli

Jia Jia, Vladimir V. Lunin, Véronique Sauvé, Li-Wei Huang, Allan Matte, Miroslaw Cygler

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2002

Language:

english

File:

PDF, 171 KB

english, 2002

25

Crystal structure of D-ribose-5-phosphate isomerase (RpiA) from Escherichia coli

Erumbi S. Rangarajan, J. Sivaraman, Allan Matte, Miroslaw Cygler

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2002

Language:

english

File:

PDF, 371 KB

english, 2002

26

The structural genomics experimental pipeline: Insights from global target lists

Nicholas O'Toole, Marek Grabowski, Zbyszek Otwinowski, Wladek Minor, Miroslaw Cygler

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2004

Language:

english

File:

PDF, 407 KB

english, 2004

27

Design of a data model for developing laboratory information management and analysis systems for protein production

Anne Pajon, John Ionides, Jon Diprose, Joël Fillon, Rasmus Fogh, Alun W. Ashton, Helen Berman, Wayne Boucher, Miroslaw Cygler, Emeline Deleury, Robert Esnouf, Joël Janin, Rosalind Kim, Isabelle Krimm,

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2005

Language:

english

File:

PDF, 677 KB

english, 2005

28

Crystal structure of ureidoglycolate hydrolase (AllA) from Escherichia coli O157:H7

Stephane Raymond, Ante Tocilj, Eunice Ajamian, Yunge Li, Ming-Ni Hung, Allan Matte, Miroslaw Cygler

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2005

Language:

english

File:

PDF, 365 KB

english, 2005

29

NMR structure of YcgL, a conserved protein from Escherichia coli representing the DUF709 family, with a novel α/β/α sandwich fold

Ovidiu M. Minailiuc, Olga Vavelyuk, Shaifali Gandhi, Ming-Ni Hung, Miroslaw Cygler, Irena Ekiel

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2007

Language:

english

File:

PDF, 906 KB

english, 2007

30

Trapping open and closed forms of FitE—A group III periplasmic binding protein

Rong Shi, Ariane Proteau, John Wagner, Qizhi Cui, Enrico O. Purisima, Allan Matte, Miroslaw Cygler

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2009

Language:

english

File:

PDF, 622 KB

english, 2009

31

Crystal structure of the complex of human α-thrombin and nonhydrolyzable bifunctional inhibitors, hirutonin—2 and hirutonin—6

Alexander Zdanov, Shan Wu, John DiMaio, Yasuo Konishi, Yunge Li, Xinjie Wu, Brian F. P. Edwards, Philip D. Martin, Miroslaw Cygler

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

1993

Language:

english

File:

PDF, 1.24 MB

english, 1993

32

Insights into the biology ofEscherichia colithrough structural proteomics

Allan Matte, Zongchao Jia, S. Sunita, J. Sivaraman, Miroslaw Cygler

Journal:

Journal of Structural and Functional Genomics

Year:

2007

Language:

english

File:

PDF, 455 KB

english, 2007

33

Biochemical and Crystallographic Studies Reveal a Specific Interaction Between TRAPP Subunits Trs33p and Bet3p

Min-Sung Kim, Min-Ju Yi, Kwang-Hoon Lee, John Wagner, Christine Munger, Yeon-Gil Kim, Malcolm Whiteway, Miroslaw Cygler, Byung-Ha Oh, Michael Sacher

Journal:

Year:

2005

Language:

english

File:

PDF, 683 KB

english, 2005

34

10.1038/3519

Lee, Jeremy S., Fletcher, Michael C., Kuderova, Alena, Cygler, Miroslaw

Journal:

Nature Biotechnology

Year:

1998

Language:

english

File:

PDF, 81 KB

english, 1998

35

Ser-His-Glu triad forms the catalytic site of the lipase from Geotrichum candidum

Schrag, Joseph D., Li, Yunge, Wu, Shan, Cygler, Miroslaw

Journal:

Year:

1991

File:

PDF, 414 KB

1991

36

10.1038/35195

Lee, Jeremy S., Fletcher, Michael C., Kuderova, Alena, Cygler, Miroslaw

Journal:

Year:

1998

Language:

english

File:

PDF, 103 KB

english, 1998

37

10.1038/35193

Lee, Jeremy S., Fletcher, Michael C., Kuderova, Alena, Cygler, Miroslaw

Journal:

Year:

1998

Language:

english

File:

PDF, 295 KB

english, 1998

38

Snapshots along the pathway

Cygler, Miroslaw

Journal:

Year:

1993

File:

PDF, 282 KB

1993

39

Protein crystallography by the book

Cygler, Miroslaw

Journal:

Natural Structural Biology

Year:

1995

File:

PDF, 266 KB

1995

40

Structure of a calpain Ca2+-binding domain reveals a novel EF-hand and Ca2+-induced conformational changes

Blanchard, Helen, Grochulski, Pawel, Li, Yunge, Arthur, J. Simon C., Davies, Peter L., Elce, John S., Cygler, Miroslaw

Journal:

Natural Structural Biology

Year:

1997

File:

PDF, 977 KB

1997

41

Structure of the 16S rRNA pseudouridine synthase RsuA bound to uracil and UMP

Sivaraman, J., Sauvé, Véronique, Larocque, Robert, Stura, Enrico A., Schrag, Joseph D., Cygler, Miroslaw, Matte, Allan

Journal:

Natural Structural Biology

Year:

2002

Language:

english

File:

PDF, 2.87 MB

english, 2002

42

Letter to the Editor:1H,13C and15N resonance assignments of human 5,10-methenyltetrahydrofolate synthetase

Evelyne H. Copeland, Irena Ekiel, Miroslaw Cygler

Journal:

Journal of Biomolecular NMR

Year:

2004

Language:

english

File:

PDF, 82 KB

english, 2004

43

Structural context for protein N-glycosylation in bacteria: The structure of PEB3, an adhesin from Campylobacter jejuni

Erumbi S. Rangarajan, Smita Bhatia, David C. Watson, Christine Munger, Miroslaw Cygler, Allan Matte, N. Martin Young

Journal:

Protein Science

Year:

2007

Language:

english

File:

PDF, 402 KB

english, 2007

44

Purification and characterization of aPenicilliumsp. lipase which discriminates against diglycerides

Komola Gulomova, Edmund Ziomek, Joseph D. Schrag, Kahramon Davranov, Miroslaw Cygler

Journal:

Year:

1996

Language:

english

File:

PDF, 694 KB

english, 1996

45

Asparagine 405 of heparin lyase II prevents the cleavage of glycosidic linkages proximate to a 3-O-sulfoglucosamine residue

Wenjing Zhao, Marie-Line Garron, Bo Yang, Zhongping Xiao, Jeffrey D. Esko, Miroslaw Cygler, Robert J. Linhardt

Journal:

Year:

2011

Language:

english

File:

PDF, 879 KB

english, 2011

46

Defining Substrate Characteristics from 3D Structure: Perspective on EstA Structure

Joseph D Schrag, Miroslaw Cygler

Journal:

Year:

2004

Language:

english

File:

PDF, 39 KB

english, 2004

47

Crystal Structure of the bb′ Domains of the Protein Disulfide Isomerase ERp57

Guennadi Kozlov, Pekka Maattanen, Joseph D. Schrag, Stephanie Pollock, Miroslaw Cygler, Bhushan Nagar, David Y. Thomas, Kalle Gehring

Journal:

Year:

2006

Language:

english

File:

PDF, 532 KB

english, 2006

48

Structure of the Noncatalytic Domains and Global Fold of the Protein Disulfide Isomerase ERp72

Guennadi Kozlov, Pekka Määttänen, Joseph D. Schrag, Greg L. Hura, Lisa Gabrielli, Miroslaw Cygler, David Y. Thomas, Kalle Gehring

Journal:

Year:

2009

Language:

english

File:

PDF, 1.50 MB

english, 2009

49

Structure of Hydrogenase Maturation Protein HypF with Reaction Intermediates Shows Two Active Sites

Svetlana Petkun, Rong Shi, Yunge Li, Abdalin Asinas, Christine Munger, Linhua Zhang, Mandy Waclawek, Basem Soboh, R. Gary Sawers, Miroslaw Cygler

Journal:

Year:

2011

Language:

english

File:

PDF, 1.25 MB

english, 2011

50

Synthesis, structural, and biological studies on a pseudodisaccharide containing a bicyclic, bridged carba-sugar

Zsolt Fejes, Tibor Kurtán, Gerhard Raabe, Jörg Fleischhauer, László Szilágyi, Attila Bényei, Zoltán Gál, Wenjing Zhao, Robert J. Linhardt, Miroslaw Cygler, Pál Herczegh

Journal:

Tetrahedron: Asymmetry

Year:

2011

Language:

english

File:

PDF, 697 KB

english, 2011

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